Desorption ionization combined with tandem mass spectrometry: Advantages for investigating complex lipids,disaccharides and organometallic complexes

Combining desorption ionization with tandem mass spectrometry overcomes the disadvantage of limited fragmentation accompanying desorption and permits mixtures of closely related substances to be investigated directly. These features of the combination are illustrated by completing the structure-proof of a minor component of an ornithine-containing lipid mixture isolated from Thiobacillus thiooxidans. The minor component is a homolog of the major constituent and differs from the principal component owing to the presence of a double bond in lieu of a cyclopropyl ring in one of the constituent fatty acids. Another feature of the combined method is the potentially complementary nature of collision-activated dissociation spectra of protonated and cationized biomolecules. This is illustrated by the differences in the collision-activated dissociations of the [M + Na]⁺ of sucrose, desorbed by field desorption, and [M + H]⁺, desorbed by fast atom bombardment. A third illustration is the application of field desorption and tandem mass spectrometry to an organometallic compound. The combined approach allows the ligands to be identified and the relative ligand binding energies to be approximated.     

Fragmentation of electrospray-produced oligodeoxynucleotide ions adducted to metal ions

In this article, we describe the unique fragmentations of oligodeoxynucleotides (ODNs) whose phosphate groups are completely depleted of protons and replaced with metal ions. The production of the ubiquitous [a(n) - base] ions still occurs, but no longer by transfer of an acidic phosphate proton to an adjoining 3' base. Nor is the extent of the reaction determined by the proton affinity of that base. Rather, the reaction now occurs via a cleavage 3' to both pyrimidines and purines; cleavage 3' to pyrimidine is more favorable than that 3' to purine. We also demonstrate that an ODN is more stable in the gas phase when its phosphate groups are bound to metal ions than when its phosphate groups are attached to hydrogens. This study also provides further evidence for the ODN fragmentation mechanism that involves H transfer to a nucleobase. To establish the structural utility of this new fragmentation, we applied it to distinguishing small ODNs containing a photomodified cis,syn-cyclobutane pyrimidine dimer from the parent ODNs, a system that cannot be distinguished by collisional activation of precursor species that do not contain metal ions.     

Die chemie der schweren carben-analogen R2M,M = Si,Ge, Sn: IX. Eigenschaften und thermolyse von neuen 7-silabicyclo[2.2.1]heptadienen

Factors governing the ease and mechanism of 7-silabicyclo[2.2.1]heptadienes thermolysis in order to generate free silylenes and the corresponding benzene derivatives are investigated. For this purpose, 29 new compounds of the types VII–X have been prepared. No indications for a polar mechanism or an intermediate biradical could be found. The degradation is exactly of first order in all cases investigated sofar, and is enhanced by phenyl groups at the bridgehead C atoms, if a conformation coplanar with the basic ring is allowed by the neighbouring substituents, but is not enhanced by phenyl groups at the Si. The X-ray structure of two typical derivatives is discussed with this respect. A special mechanism is operating in the easy thermolysis of carbomethoxy-substituted compounds leading to cyclic sila enolether intermediates.     

Alkane loss from collisionally activated alkylmethyleneimmonium ions

The collision-induced dissociation (CID) spectra of five alkylmethyleneimmonium ions (H₂C-N⁺R¹R², (a) R¹ = R² = C₂H₅, (b) R¹ = n-C₃H₇, R² = H, (c) R¹ = n-C₃H₇, R² = CH₃, (d) R¹ = n-C₃H₇, R² = C₂H₅, (e) R¹ = R² = n-C₃H₇) are reported and discussed in terms of the mechanism of alkane loss. The most abundant alkane losses result from 2-azaallylic bond cleavages within R¹ and R² leading to daughter ions of m/z 84. Ion d (R¹ = n-C₃H₇, R² = C₂H₅) was chosen for a deuterium-labelling study because it exhibited methane loss nearly free from interferences with other fragmentations. The methane lost consists to a great extent (95%) of the methyl moiety of R². Whereas the methyl moiety obviously stays intact during the fragmentation process, the hydrogen additionally needed originates from all positions of R¹ and the double-bonded methylene in an approximately random distribution, suggesting extensive hydrogen migrations preceding the transfer step.     

Photocatalytic TiO2 Coatings: Effect of Substrate and Template

Transparent TiO₂ films with a high photodegradation activity towards an azo dye in aqueous solution were prepared by sol–gel processing. Films on soda–lime glass supports protected with a thin silica barrier layer exhibited better crystallization and monodisperse nanoparticles, higher absorption of light below 370 nm, and higher photocatalytic activity than those films deposited on bare glass supports proving the detrimental effect of interdiffused sodium ions on the development of the anatase nanostructure. The effect of substrate was more pronounced in thinner films (300 nm) than in thicker ones (1200 nm), which were achieved by adding a template (i.e. Pluronic F127) to the sol.     

High-dimensional quantum dynamical study of the dissociation of H2 on Pd110

We report the first six-dimensional quantum dynamical study of the dissociative adsorption of H(2) on a (110) surface. We have performed quantum coupled-channel calculations for the system H(2)/Pd(110) based on a potential energy surface (PES) that was derived from ab initio electronic structure calculations. In particular, we have focused on the effects of the corrugation and anisotropy of the PES on the H(2) dissociation probability. Our results agree well with the available experimental data for the sticking probability as a function of the initial kinetic energy and the angle of incidence. Because of the coupling between the anisotropy and corrugation of the potential energy surface our calculations predict an unusual rotational heating and a rather small rotational alignment in desorption.     

Alstonia scholaris: Struktur des Indolalkaloides Narelin

Alstonia scholaris: The structure of the indole alkaloid nareline Besides the known akuammidine, picralinal, picrinine and pseudoakuammigine a new indole alkaloid called nareline (M=352) was isolated from Alstonia scholaris R. BR. , which belongs to the plant family of Apocynaceae. Its structure 2 was deduced by single crystal X-ray diffraction. 2 represents the absolute configuration. The spectroscopic data of 2 and its derivatives (Scheme 1) as well as their chemical behavior support this structure. In biogenetic sense nareline is related to the bases akuammiline ( 4 ) and picraline ( 5 ) (Scheme 2). In contrast to those the C-atom 5 is exocyclic and represents an aldehyde group which forms together with the oxygen atom of the N (4)-hydroxylamine group a cyclic half acetale. - By oxidation (CrO₃/CH₃COOH) of 2 the oxindol derivative 19 (oxonareline) is formed which contains a cyclic acetal as a partial structure element (Scheme 4).     

Umsetzungen von Meldrumsäure mit Isocyanaten und Isothiocyanaten

Summary Meldrum's acid (1) reacts with isothiocyanates and LiH as base, yielding after alkylation the ketene-S,N-acetales3,4 and5. Protonation of the lithium-thiolate2 gives the thioamides7 with tautomers8, which can be methylated with diazomethane to9. From1 and7 it is possible to obtain the amides12.2 reacts with -bromo-carboxylic esters and bromo-acetone, yielding thiazolidones15,16 and thiazolines18.